YOUR mRNA SEQUENCE → DETAILED STRUCTURE PREDICTION
RNAfoldAdvanced mRNA Structure Prediction Tool
Calculate minimum free energy (MFE), predict messenger RNA secondary structures, and visualize folding patterns with our interactive mRNA structure analysis tool.
RNAfold - mRNA Structure Analysis and Visualization
Calculate minimum free energy (MFE), predict secondary structures, and visualize mRNA folding patterns with our advanced structure analysis tool, designed specifically for messenger RNA.
Enter RNA sequence using A, U, G, and C nucleotides
RNAfold Settings
RNAfold Structure
Predicts mRNA secondary structure based on minimum free energy (MFE) and partition function calculations. This tool provides dot-bracket notation of the structure and base-pairing information.
Folding Results
RNA analysis results will appear here
RNAfold - mRNA Structure Analysis and VisualizationComprehensive mRNA Structure Prediction Tool
Calculate minimum free energy (MFE), predict secondary structures, and visualize mRNA folding patterns with our advanced structure analysis tool, designed specifically for messenger RNA.
Input Your mRNA Sequence
Enter messenger RNA sequence or upload a FASTA file for folding analysis
Configure Folding Parameters
Select energy models and folding algorithms for optimal mRNA structure predictions
View Structure Analysis Results
Explore interactive visualizations of mRNA secondary structures
Why Choose Our mRNA Structure Tool
Comprehensive RNA Structure Analysis
Our advanced mRNA folding tool provides accurate structure predictions with multiple visualization options to understand complex messenger RNA folding patterns.
- Accurate mRNA Structure Prediction
Calculate minimum free energy (MFE) using state-of-the-art thermodynamic models to predict the most energetically favorable messenger RNA structures.
- Interactive Structure Visualization
Explore mRNA secondary structures through interactive visualizations that allow zooming, panning, and highlighting of specific structural elements for deeper analysis.
- Base Pair Probability Matrix
Compute and visualize base pair probabilities (pij) to understand the ensemble of possible structures and identify regions of structural flexibility or stability.
- Comparative Structure Analysis
Compare structural features across multiple mRNA sequences to identify conserved motifs and functional elements critical for mRNA activity and regulation.
What Researchers Say About RNAfold
Join researchers who have accelerated their mRNA structure analysis
Real feedback from our community of researchers. See how our mRNA folding tool has transformed structure prediction and analysis workflows.
"RNAfold has significantly improved our mRNA structure prediction accuracy. The interactive visualizations and probability matrix analysis have helped us identify critical structural motifs in our therapeutic mRNA candidates."
Dr. Emily Chen
RNA Biologist
"The ability to calculate MFE and visualize secondary structures in one platform has streamlined our comparative analysis workflow. The base pair probability matrices provide valuable insights into structure ensemble dynamics."
Prof. James Wilson
Computational Biologist
"RNAfold's accurate structure predictions have been instrumental in our mRNA drug discovery pipeline. The customizable folding parameters allow us to simulate various physiological conditions, improving our design process."
Sarah Johnson
Pharmaceutical Researcher
"The base pair probability visualization in RNAfold revealed alternative conformations in our mRNA therapeutic that we hadn't identified with other tools. This insight led to a critical redesign that improved its stability by 60%."
Dr. Thomas Zhang
Biotech R&D Director
Frequently Asked Questions About RNAfold
Find answers to common questions about our mRNA structure prediction tool
Learn more about how our mRNA folding capabilities can enhance your research and streamline structure analysis.
Experience RNAfold Today
Accelerate Your mRNA Structure Research
Join researchers worldwide who rely on RNAfold for accurate structure prediction and insightful visualization.
- Accurate MFE calculation and secondary structure prediction
- Interactive structure visualization and base pair probability analysis
- Customizable folding parameters for diverse research needs
- Exportable results in multiple formats for publication and analysis