YOUR SEQUENCE → COMPREHENSIVE mRNA ANALYSIS
mrna.appAll-in-One Messenger RNA (mRNA) Analysis Platform
Streamline your mRNA research with our comprehensive suite of analysis tools. Calculate codon CAI, predict mRNA structure, visualize secondary structures, and generate optimized mRNA sequences - all in one platform.


Unlock the Full Potential of mRNA Research
mrna.app integrates essential mRNA analysis tools, providing comprehensive support to accelerate your messenger RNA research from basic analysis to application development.
Select the species for codon usage optimization
Enter mRNA sequence using A, U, G, and C nucleotides
CAI Calculator
Calculates the Codon Adaptation Index (CAI) for your RNA sequence. CAI measures the relative adaptiveness of the codon usage of a gene towards the codon usage of highly expressed genes.
Analysis Results
RNA analysis results will appear here
Unlock the Full Potential of mRNA ResearchFour Powerful Tools in One Platform - Simplify Your mRNA Analysis Workflow
mrna.app integrates essential mRNA analysis tools, providing comprehensive support to accelerate your messenger RNA research from basic analysis to application development.
Input Your Sequence
Enter mRNA/DNA sequence or upload a FASTA file

Choose Analysis Tool
Select from our four specialized mRNA analysis tools

Get Comprehensive Results
View interactive visualizations and download detailed analysis

Why Choose mrna.app
Complete mRNA Analysis Toolkit
Our integrated suite of mRNA analysis tools eliminates the need to switch between different platforms, streamlining your research workflow from sequence analysis to optimization.
- Comprehensive mRNA Analysis
Access four essential tools in one platform: Codon CAI calculation, mRNA structure prediction, secondary structure visualization, and mRNA sequence generation with optimization.
- Interactive mRNA Visualizations
Gain deeper insights with interactive visualizations for mRNA secondary structures, codon usage charts, and comparative analyses that help you understand complex messenger RNA data at a glance.
- Research-Grade Algorithms
Benefit from industry-recognized algorithms optimized for accuracy and efficiency, supporting polycistronic mRNA sequences with batch processing capabilities for high-throughput analysis.
- Seamless Data Integration
Easily share and transfer data between different analysis tools without format conversion, allowing for comprehensive end-to-end mRNA workflow from sequence analysis to optimization.
What Researchers Say About mrna.app
Join thousands of researchers who have accelerated their mRNA analysis workflow
Real feedback from our community of researchers. See how our integrated platform has transformed mRNA analysis workflows across academia and industry.
"mrna.app has significantly accelerated our mRNA vaccine research. The integration of structure prediction with sequence optimization tools helped us improve candidate stability by 40%, streamlining our design-to-testing workflow."
Dr. Emily Chen
Molecular Biologist
"As someone who regularly works with mRNA structures, having secondary structure prediction and MFE calculation in one platform has been invaluable. The interactive visualizations make it much easier to explain complex structures to students."
Prof. James Wilson
Academic Researcher
"The codon optimization tools in mrna.app helped us increase protein expression levels by 3-fold compared to our previous approach. The ability to switch between different analysis tools without reformatting data saves us hours every week."
Sarah Johnson
Biotech Researcher
"mrna.app's batch processing capabilities revolutionized our high-throughput screening pipeline. We can now analyze hundreds of mRNA candidates simultaneously, which has cut our development timeline in half."
Dr. Michael Rodriguez
Pharmaceutical Scientist
Frequently Asked Questions About mrna.app
Find answers to common questions about our mRNA analysis platform
Learn more about how our integrated tools can streamline your mRNA research workflow and accelerate your discoveries.
Experience mrna.app Today
Accelerate Your mRNA Research with Our Integrated Analysis Platform
Join thousands of researchers who have streamlined their mRNA analysis workflow with our comprehensive suite of tools.
- Four integrated tools: Codon CAI, MFE, Structure Prediction, Codon Analysis, mRNA Prediction & Sequence Generation
- Interactive visualizations and exportable results
- Batch processing for high-throughput analysis
- Research-grade algorithms with validated accuracy